|
|
|
|||
| Home Help Feedback Subscriptions Archive Search Table of Contents | ||||
Development, Vol 126, Issue 23 5231-5243, Copyright © 1999 by Company of Biologists
JOURNAL ARTICLES |
SE Jacobsen, MP Running and EM Meyerowitz
Division of Biology 156-29, California Institute of Technology, Pasadena, CA 91125, USA. jacobsen@ucla.edu
Arabidopsis thaliana floral meristems are determinate structures that produce a defined number of organs, after which cell division ceases. A new recessive mutant, carpel factory (caf), converts the floral meristems to an indeterminate state. They produce extra whorls of stamens, and an indefinite number of carpels. Thus, CAF appears to suppress cell division in floral meristems. The function of CAF is partially redundant with the function of the CLAVATA (CLV) and SUPERMAN (SUP) genes, as caf clv and caf sup double mutants show dramatically enhanced floral meristem over-proliferation. caf mutant plants also show other defects, including absence of axillary inflorescence meristems, and abnormally shaped leaves and floral organs. The CAF gene was cloned and found to encode a putative protein of 1909 amino acids containing an N-terminal DExH/DEAD-box type RNA helicase domain attached to a C-terminal RNaseIII-like domain. A very similar protein of unknown function is encoded by a fungal and an animal genome. Helicase proteins are involved in a number of processes, including specific mRNA localization and mRNA splicing. RNase III proteins are involved in the processing of rRNA and some mRNA molecules. Thus CAF may act through some type of RNA processing event(s). CAF gives rise to two major transcripts of 2.5 and 6.2 kb. In situ hybridization experiments show that CAF RNA is expressed throughout all shoot tissues.
This article has been cited by other articles:
![]() |
B. Yu, L. Bi, B. Zheng, L. Ji, D. Chevalier, M. Agarwal, V. Ramachandran, W. Li, T. Lagrange, J. C. Walker, et al. The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis PNAS, July 22, 2008; 105(29): 10073 - 10078. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. Eamens, M.-B. Wang, N. A. Smith, and P. M. Waterhouse RNA Silencing in Plants: Yesterday, Today, and Tomorrow Plant Physiology, June 1, 2008; 147(2): 456 - 468. [Full Text] [PDF] |
||||
![]() |
D. Li, H. Liu, H. Zhang, X. Wang, and F. Song OsBIRH1, a DEAD-box RNA helicase with functions in modulating defence responses against pathogen infection and oxidative stress J. Exp. Bot., May 1, 2008; 59(8): 2133 - 2146. [Abstract] [Full Text] [PDF] |
||||
![]() |
R. F. Degenhardt and P. C. Bonham-Smith Arabidopsis Ribosomal Proteins RPL23aA and RPL23aB Are Differentially Targeted to the Nucleolus and Are Disparately Required for Normal Development Plant Physiology, May 1, 2008; 147(1): 128 - 142. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Yi and E. J. Richards A Cluster of Disease Resistance Genes in Arabidopsis Is Coordinately Regulated by Transcriptional Activation and RNA Silencing PLANT CELL, September 1, 2007; 19(9): 2929 - 2939. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. Kocyan The Discovery of Polyandry in Curculigo (Hypoxidaceae): Implications for Androecium Evolution of Asparagoid Monocotyledons Ann. Bot., August 1, 2007; 100(2): 241 - 248. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. H. Chitwood, M. Guo, F. T. S. Nogueira, and M. C. P. Timmermans Establishing leaf polarity: the role of small RNAs and positional signals in the shoot apex Development, March 1, 2007; 134(5): 813 - 823. [Abstract] [Full Text] [PDF] |
||||
![]() |
F. Wu, L. Yu, W. Cao, Y. Mao, Z. Liu, and Y. He The N-Terminal Double-Stranded RNA Binding Domains of Arabidopsis HYPONASTIC LEAVES1 Are Sufficient for Pre-MicroRNA Processing PLANT CELL, March 1, 2007; 19(3): 914 - 925. [Abstract] [Full Text] [PDF] |
||||
![]() |
H.-M. Chen, Y.-H. Li, and S.-H. Wu Bioinformatic prediction and experimental validation of a microRNA-directed tandem trans-acting siRNA cascade in Arabidopsis PNAS, February 27, 2007; 104(9): 3318 - 3323. [Abstract] [Full Text] [PDF] |
||||
![]() |
Y. Ueno, T. Ishikawa, K. Watanabe, S. Terakura, H. Iwakawa, K. Okada, C. Machida, and Y. Machida Histone Deacetylases and ASYMMETRIC LEAVES2 Are Involved in the Establishment of Polarity in Leaves of Arabidopsis PLANT CELL, February 1, 2007; 19(2): 445 - 457. [Abstract] [Full Text] [PDF] |
||||
![]() |
G. Moissiard and O. Voinnet RNA silencing of host transcripts by cauliflower mosaic virus requires coordinated action of the four Arabidopsis Dicer-like proteins PNAS, December 19, 2006; 103(51): 19593 - 19598. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Arteaga-Vazquez, J. Caballero-Perez, and J.-P. Vielle-Calzada A Family of MicroRNAs Present in Plants and Animals PLANT CELL, December 1, 2006; 18(12): 3355 - 3369. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Ronemus, M. W. Vaughn, and R. A. Martienssen MicroRNA-Targeted and Small Interfering RNA-Mediated mRNA Degradation Is Regulated by Argonaute, Dicer, and RNA-Dependent RNA Polymerase in Arabidopsis PLANT CELL, July 1, 2006; 18(7): 1559 - 1574. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Hirsch, V. Lefort, M. Vankersschaver, A. Boualem, A. Lucas, C. Thermes, Y. d'Aubenton-Carafa, and M. Crespi Characterization of 43 Non-Protein-Coding mRNA Genes in Arabidopsis, Including the MIR162a-Derived Transcripts Plant Physiology, April 1, 2006; 140(4): 1192 - 1204. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Mlotshwa, S. E. Schauer, T. H. Smith, A. C. Mallory, J.M. Herr Jr., B. Roth, D. S. Merchant, A. Ray, L. H. Bowman, and V. B. Vance Ectopic DICER-LIKE1 Expression in P1/HC-Pro Arabidopsis Rescues Phenotypic Anomalies but Not Defects in MicroRNA and Silencing Pathways PLANT CELL, November 1, 2005; 17(11): 2873 - 2885. [Abstract] [Full Text] [PDF] |
||||
![]() |
B. Liu, P. Li, X. Li, C. Liu, S. Cao, C. Chu, and X. Cao Loss of Function of OsDCL1 Affects MicroRNA Accumulation and Causes Developmental Defects in Rice Plant Physiology, September 1, 2005; 139(1): 296 - 305. [Abstract] [Full Text] [PDF] |
||||
![]() |
Z. Gong, C.-H. Dong, H. Lee, J. Zhu, L. Xiong, D. Gong, B. Stevenson, and J.-K. Zhu A DEAD Box RNA Helicase Is Essential for mRNA Export and Important for Development and Stress Responses in Arabidopsis PLANT CELL, January 1, 2005; 17(1): 256 - 267. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. A. Parizotto, P. Dunoyer, N. Rahm, C. Himber, and O. Voinnet In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA Genes & Dev., September 15, 2004; 18(18): 2237 - 2242. [Abstract] [Full Text] [PDF] |
||||
![]() |
Q. Wang and G. G. Carmichael Effects of Length and Location on the Cellular Response to Double-Stranded RNA Microbiol. Mol. Biol. Rev., September 1, 2004; 68(3): 432 - 452. [Abstract] [Full Text] [PDF] |
||||
![]() |
P. Laufs, A. Peaucelle, H. Morin, and J. Traas MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems Development, September 1, 2004; 131(17): 4311 - 4322. [Abstract] [Full Text] [PDF] |
||||
![]() |
Y. Kurihara and Y. Watanabe From The Cover: Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions PNAS, August 24, 2004; 101(34): 12753 - 12758. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. A. McHale and R. E. Koning MicroRNA-Directed Cleavage of Nicotiana sylvestris PHAVOLUTA mRNA Regulates the Vascular Cambium and Structure of Apical Meristems PLANT CELL, July 1, 2004; 16(7): 1730 - 1740. [Abstract] [Full Text] [PDF] |
||||
![]() |
I. Tzafrir, R. Pena-Muralla, A. Dickerman, M. Berg, R. Rogers, S. Hutchens, T. C. Sweeney, J. McElver, G. Aux, D. Patton, et al. Identification of Genes Required for Embryo Development in Arabidopsis Plant Physiology, July 1, 2004; 135(3): 1206 - 1220. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Catala, B. Lamontagne, S. Larose, G. Ghazal, and S. A. Elela Cell Cycle-dependent Nuclear Localization of Yeast RNase III Is Required for Efficient Cell Division Mol. Biol. Cell, July 1, 2004; 15(7): 3015 - 3030. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. Jack Molecular and Genetic Mechanisms of Floral Control PLANT CELL, June 1, 2004; 16(suppl_1): S1 - S17. [Full Text] [PDF] |
||||
![]() |
D. J. Skinner, T. A. Hill, and C. S. Gasser Regulation of Ovule Development PLANT CELL, June 1, 2004; 16(suppl_1): S32 - S45. [Full Text] [PDF] |
||||
![]() |
P. Dunoyer, C.-H. Lecellier, E. A. Parizotto, C. Himber, and O. Voinnet Probing the MicroRNA and Small Interfering RNA Pathways with Virus-Encoded Suppressors of RNA Silencing PLANT CELL, May 1, 2004; 16(5): 1235 - 1250. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. Chen, W. X. Li, D. Xie, J. R. Peng, and S. W. Ding Viral Virulence Protein Suppresses RNA Silencing-Mediated Defense but Upregulates the Role of MicroRNA in Host Gene Expression PLANT CELL, May 1, 2004; 16(5): 1302 - 1313. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. H. Tuteja, S. J. Clough, W.-C. Chan, and L. O. Vodkin Tissue-Specific Gene Silencing Mediated by a Naturally Occurring Chalcone Synthase Gene Cluster in Glycine max PLANT CELL, April 1, 2004; 16(4): 819 - 835. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. A. Borkovich, L. A. Alex, O. Yarden, M. Freitag, G. E. Turner, N. D. Read, S. Seiler, D. Bell-Pedersen, J. Paietta, N. Plesofsky, et al. Lessons from the Genome Sequence of Neurospora crassa: Tracing the Path from Genomic Blueprint to Multicellular Organism Microbiol. Mol. Biol. Rev., March 1, 2004; 68(1): 1 - 108. [Abstract] [Full Text] [PDF] |
||||
![]() |
M.-H. Han, S. Goud, L. Song, and N. Fedoroff The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation PNAS, January 27, 2004; 101(4): 1093 - 1098. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Wang, K. Hill, and S. E. Perry An Arabidopsis RNA Lariat Debranching Enzyme Is Essential for Embryogenesis J. Biol. Chem., January 9, 2004; 279(2): 1468 - 1473. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Agrawal, P. V. N. Dasaradhi, A. Mohmmed, P. Malhotra, R. K. Bhatnagar, and S. K. Mukherjee RNA Interference: Biology, Mechanism, and Applications Microbiol. Mol. Biol. Rev., December 1, 2003; 67(4): 657 - 685. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. Tuteja Plant DNA helicases: the long unwinding road J. Exp. Bot., October 1, 2003; 54(391): 2201 - 2214. [Abstract] [Full Text] [PDF] |
||||
![]() |
L. Mlynarova, A. Hricova, A. Loonen, and J.-P. Nap The Presence of a Chromatin Boundary Appears to Shield a Transgene in Tobacco from RNA Silencing PLANT CELL, September 1, 2003; 15(9): 2203 - 2217. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Melquist and J. Bender Transcription from an upstream promoter controls methylation signaling from an inverted repeat of endogenous genes in Arabidopsis Genes & Dev., August 15, 2003; 17(16): 2036 - 2047. [Abstract] [Full Text] [PDF] |
||||
![]() |
I. Papp, M. F. Mette, W. Aufsatz, L. Daxinger, S. E. Schauer, A. Ray, J. van der Winden, M. Matzke, and A. J.M. Matzke Evidence for Nuclear Processing of Plant Micro RNA and Short Interfering RNA Precursors Plant Physiology, July 1, 2003; 132(3): 1382 - 1390. [Abstract] [Full Text] [PDF] |
||||
![]() |
L. R. SAUNDERS and G. N. BARBER The dsRNA binding protein family: critical roles, diverse cellular functions FASEB J, June 1, 2003; 17(9): 961 - 983. [Abstract] [Full Text] [PDF] |
||||
![]() |
B. Bartel and D. P. Bartel MicroRNAs: At the Root of Plant Development? Plant Physiology, June 1, 2003; 132(2): 709 - 717. [Full Text] [PDF] |
||||
![]() |
B. A. Kosciolek, K. Kalantidis, M. Tabler, and P. T. Rowley Inhibition of Telomerase Activity in Human Cancer Cells by RNA Interference Mol. Cancer Ther., March 1, 2003; 2(3): 209 - 216. [Abstract] [Full Text] [PDF] |
||||
![]() |
G. Tang, B. J. Reinhart, D. P. Bartel, and P. D. Zamore A biochemical framework for RNA silencing in plants Genes & Dev., January 1, 2003; 17(1): 49 - 63. [Abstract] [Full Text] [PDF] |
||||
![]() |
P. Provost, R. A. Silverstein, D. Dishart, J. Walfridsson, I. Djupedal, B. Kniola, A. Wright, B. Samuelsson, O. Radmark, and K. Ekwall Dicer is required for chromosome segregation and gene silencing in fission yeast cells PNAS, December 24, 2002; 99(26): 16648 - 16653. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. C. Mallory, B. J. Reinhart, D. Bartel, V. B. Vance, and L. H. Bowman From the Cover: A viral suppressor of RNA silencing differentially regulates the accumulation of short interfering RNAs and micro-RNAs in tobacco PNAS, November 12, 2002; 99(23): 15228 - 15233. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. Kakutani Epi-Alleles in Plants: Inheritance of Epigenetic Information over Generations Plant Cell Physiol., October 15, 2002; 43(10): 1106 - 1111. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. A. Golden, S. E. Schauer, J. D. Lang, S. Pien, A. R. Mushegian, U. Grossniklaus, D. W. Meinke, and A. Ray Short Integuments1/suspensor1/carpel Factory, a Dicer Homolog, Is a Maternal Effect Gene Required for Embryo Development in Arabidopsis Plant Physiology, October 1, 2002; 130(2): 808 - 822. [Abstract] [Full Text] [PDF] |
||||
![]() |
R. A. Jorgensen RNA traffics information systemically in plants PNAS, September 3, 2002; 99(18): 11561 - 11563. [Full Text] [PDF] |
||||
![]() |
Z. Gong, H. Lee, L. Xiong, A. Jagendorf, B. Stevenson, and J.-K. Zhu RNA helicase-like protein as an early regulator of transcription factors for plant chilling and freezing tolerance PNAS, August 20, 2002; 99(17): 11507 - 11512. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. F. Kreuze, E. I. Savenkov, and J. P. T. Valkonen Complete Genome Sequence and Analyses of the Subgenomic RNAs of Sweet Potato Chlorotic Stunt Virus Reveal Several New Features for the Genus Crinivirus J. Virol., August 12, 2002; 76(18): 9260 - 9270. [Abstract] [Full Text] [PDF] |
||||
![]() |
B. J. Reinhart, E. G. Weinstein, M. W. Rhoades, B. Bartel, and D. P. Bartel MicroRNAs in plants Genes & Dev., July 1, 2002; 16(13): 1616 - 1626. [Abstract] [Full Text] [PDF] |
||||
![]() |
N. A. Eckardt RNA Goes Mobile PLANT CELL, July 1, 2002; 14(7): 1433 - 1436. [Full Text] [PDF] |
||||
![]() |
R. W. Williams and G. M. Rubin ARGONAUTE1 is required for efficient RNA interference in Drosophila embryos PNAS, May 14, 2002; 99(10): 6889 - 6894. [Abstract] [Full Text] [PDF] |
||||
![]() |
A. Boutla, K. Kalantidis, N. Tavernarakis, M. Tsagris, and M. Tabler Induction of RNA interference in Caenorhabditis elegans by RNAs derived from plants exhibiting post-transcriptional gene silencing Nucleic Acids Res., April 1, 2002; 30(7): 1688 - 1694. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. Giordano, R. Rendina, I. Peluso, and M. Furia RNAi Triggered by Symmetrically Transcribed Transgenes in Drosophila melanogaster Genetics, February 1, 2002; 160(2): 637 - 648. [Abstract] [Full Text] [PDF] |
||||
![]() |
D.-c. Kang, R. V. Gopalkrishnan, Q. Wu, E. Jankowsky, A. M. Pyle, and P. B. Fisher mda-5: An interferon-inducible putative RNA helicase with double-stranded RNA-dependent ATPase activity and melanoma growth-suppressive properties PNAS, January 22, 2002; 99(2): 637 - 642. [Abstract] [Full Text] [PDF] |
||||
![]() |
T. L. Western, Y. Cheng, J. Liu, and X. Chen HUA ENHANCER2, a putative DExH-box RNA helicase, maintains homeotic B and C gene expression in Arabidopsis Development, January 4, 2002; 129(7): 1569 - 1581. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. McElver, I. Tzafrir, G. Aux, R. Rogers, C. Ashby, K. Smith, C. Thomas, A. Schetter, Q. Zhou, M. A. Cushman, et al. Insertional Mutagenesis of Genes Required for Seed Development in Arabidopsis thaliana Genetics, December 1, 2001; 159(4): 1751 - 1763. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. J. Skinner, S. C. Baker, R. J. Meister, J. Broadhvest, K. Schneitz, and C. S. Gasser The Arabidopsis HUELLENLOS Gene, Which Is Essential for Normal Ovule Development, Encodes a Mitochondrial Ribosomal Protein PLANT CELL, December 1, 2001; 13(12): 2719 - 2730. [Abstract] [Full Text] [PDF] |
||||
![]() |
E. Billy, V. Brondani, H. Zhang, U. Muller, and W. Filipowicz Specific interference with gene expression induced by long, double-stranded RNA in mouse embryonal teratocarcinoma cell lines PNAS, November 20, 2001; (2001) 261562698. [Abstract] [Full Text] [PDF] |
||||
![]() |
R. F. Ketting, S. E.J. Fischer, E. Bernstein, T. Sijen, G. J. Hannon, and R. H.A. Plasterk Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans Genes & Dev., October 15, 2001; 15(20): 2654 - 2659. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. S. Mattick and M. J. Gagen Review ArticleThe Evolution of Controlled Multitasked Gene Networks: The Role of Introns and Other Noncoding RNAs in the Development of Complex Organisms Mol. Biol. Evol., September 1, 2001; 18(9): 1611 - 1630. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Matzke, A. J. M. Matzke, and J. M. Kooter RNA: Guiding Gene Silencing Science, August 10, 2001; 293(5532): 1080 - 1083. [Abstract] [Full Text] [PDF] |
||||
![]() |
V. Vance and H. Vaucheret RNA Silencing in Plants--Defense and Counterdefense Science, June 22, 2001; 292(5525): 2277 - 2280. [Abstract] [Full Text] [PDF] |
||||
![]() |