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First published online 3 May 2006
doi: 10.1242/dev.02402


Development 133, 2089-2094 (2006)
Published by The Company of Biologists 2006


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Chromatin and epigenetics in development: blending cellular memory with cell fate plasticity

Giacomo Cavalli

Institute of Human Genetics, CNRS, 141, rue de la Cardonille, 34396 Montpellier Cédex 5, France.


Figure 1
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Fig. 1. Model depicting chromatin events during X-chromosome inactivation (XCI). (A) Before XCI, Tsix (red) is biallelically expressed and maintains the Tsix/Xist locus in an open chromatin state (bearing the active H4 acetyl and H3H4 dimethyl histone marks), which paradoxically precludes Xist transcription (blue). (B) At the onset of XCI, silencing of Tsix induces local heterochromatinization of the Tsix/Xist locus in cis (loss of H4 acetyl and H3H4 dimethyl, gain of H3H27 trimethyl), concomitant with activation of Xist in the future inactive X (Xi). (C) On the future active X (Xa), Tsix RNA induces Dnmt3a-dependent methylation of Xist, locking it into a silent state. (D) Finally, the Xist locus switches to a canonical chromatin state, with active marks on the transcribing allele (bottom) and inactive marks on the silent one (top). Reproduced, with permission, from Sun et al. (Sun et al., 2006Go).

 

Figure 2
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Fig. 2. The relationship between Polycomb group proteins and RNAi components. (A,B) Drosophila larval tissues stained with DAPI (blue), Polycomb (green), and Dcr2 (red, A) or Dcr1 (red, B). The Dcr2 RNAi enzyme stains nuclei (the nuclear rim is indicated by a circle) as prominent foci. A substantial part of these foci (arrows) colocalize with Polycomb bodies. This is not always the case for other RNAi components. The right panel shows that Dcr1, which stains the nuclear rim, does not significantly colocalize with Polycomb in the same tissues. Scale bars: 1 µm. Images courtesy of Charlotte Grimaud and Giacomo Cavalli (Institute of Human Genetics, CNRS, Montpellier, France).

 

Figure 3
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Fig. 3. Mapping the genome-wide distribution of Polycomb group (PcG) proteins in mouse and human embryonic stem (ES) cells. PcG proteins form well-known biochemical complexes: one is PCR2, which contains the H3K27-specific histone methyltransferase EZH2, and its two partners EED and SUZ12; the second complex, named PRC1, contains chromodomain mouse homologues of Drosophila Polycomb, which bind to trimethylated H3K27 and to the two interacting proteins PHC1 and RNF2. (A) A Venn diagram represents the number of genes bound by each of these components and their overlap, showing extensive colocalization among all members tested (Boyer et al., 2006Go). (B) A similar mapping for human embryonic stem cells identified a large number of transcription factor-coding genes that can be grouped into major developmental transcription factor families (Lee et al., 2006Go). This illustrates how PcG proteins regulate a variety of crucial developmental patterning processes. Figure courtesy of Rudolf Jaenisch (Whitehead Institute for Biomedical Research and Massachussets Institute of Technology, Cambridge, MA, USA).

 





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