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Fig. 2. Ciona Mesp gene. A molecular phylogenetic tree generated by the
neighbor-joining method based on the alignment of the bHLH domain indicating
orthology between Mesp proteins of two Ciona species (enclosed by
boxes) and other animals. The number on each node indicates the percentage of
times that a node was supported in 1000 bootstrap pseudoreplications. The tree
is shown as a bootstrap consensus tree (cut-off value=50%). E proteins of
Drosophila (daughterless), C. intestinalis (Ci-E12/E47) and
humans (TFE2) are used as outgroups. Proteins of animals other than ascidians
are shown by their accession number, species abbreviation and protein name.
Species abbreviations are as follows: HS, Homo sapiens; MM, Mus
musculus; DR, Danio rerio; DM, Drosophila melanogaster;
Ci, Ciona intestinalis; Cs, Ciona savignyi.